Ras model
0.1
Overview
The RAS Executable Model
EGFR
Ras
Raf
MAPK
Model scenarios
Model analysis
References
Ras model
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The RAS Executable Model (REM)
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The RAS Executable Model (REM)
ΒΆ
EGFR
EGFR (minimal)
INDRA-assembled model components
Ras
Ras proteins are GTPases
Anatomy of Ras
Ras binds GTP and GDP
Ras converts GTP to GDP
Oncogenic Ras mutants have reduced GTP binding and GTPase activity
Post-translational modifications of the C-terminus
Ras regulation by GEFs
Identities of Ras-specific GEFs
Mechanism of GEFs
Rates of GEF activation
Specificity of RASGRF1 for Ras isoforms
Ras regulation by RasGAPs
RasGAPs for the Ras subfamily
Mechanism of accelerating hydrolysis
Ras (minimal)
INDRA-assembled model components
Raf
Raf activation by Ras
Vemurafenib inhibits RAF
References
RAF (minimal)
INDRA-assembled model components
MAPK
MAPK (minimal)
INDRA-assembled model components
MAPK module with MEK inhibition